Protein ZmCA3P13 | |
---|---|
Information | |
TF Name: | ZmCA3P13 |
Species: | Maize |
TF Family: | CCAAT-HAP3 |
Gene Name(Synonym): | ZmCADR7 |
Uniprot ID: | K7UZ84 |
ZmCA3P13 is a protein in the CCAAT-HAP3 family.
Overview of domains present in v5 transcripts | ||||
---|---|---|---|---|
CCAAT-Dr1 | NF-YB | PF00125 | PF00808 | |
Zm00001eb189490_T001 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d051697 | DAPseq | sequence | fimo | position | |
Zm00001d051697 | DAPseq | sequence | fimo | position | |
Zm00001d051697 | ChIPseq | sequence | fimo | position | |
Zm00001d051697 | PChIPseq | sequence | fimo | position |
MDSSFLPAGADNGSAGGANNGGGAAQQAPPIREQDRLMPIANVIRIMRRVLPAHAKISDDAKETIQECVSEYISFITGEA
NERCQREQRKTITAEDVLWAMSRLGFDDYVEPLSVYLHRYREFEGEARGVGLAPAPPRGDHHHHHHSVPPSMLNKSRGPG
SGAVMLPHHHHHDMHASMYGGAVPPPPHHGFLMPHPQGGHYLPYPYEPTSYGGEHALASGYYGGAAYAPGNNGGSGDGSG
GSASHAPPGGSGGGFDHPHTFAYK
MDSSFLPAGADNGSAGGANNGGGAAQQAPPIREQDRLMPIANVIRIMRRVLPAHAKISDDAKETIQECVSEYISFITGEA
NERCQREQRKTITAEDVLWAMSRLGFDDYVEPLSVYLHRYREFEGEARGVGLAPAPPRGDHHHHHHSVPPSMLNKSRGPG
SGAVMLPHHHHHDMHASMYGGAVPPPPHHGFLMPHPQGGHYLPYPYEPTSYGGEHALASGYYGGAAYAPGNNGGSGDGSG
GSASHAPPGGSGGGFDHPHTFAYK
MDSSFLPAGADNGSAGGANNGGGAAQQAPPIREQDRLMPIANVIRIMRRVLPAHAKISDDAKETIQECVSEYISFITGEA
NERCQREQRKTITAEDVLWAMSRLGFDDYVEPLSVYLHRYREFEGEARGVGLAPAPPRGDHHHHHHSVPPSMLNKSRGPG
SGAVMLPHHHHHDMHASMYGGAVPPPPHHGFLMPHPQGGHYLPYPYEPTSYGGEHALASGYYGGAAYAPGNNGGSGDGSG
GSASHAPPGGSGGGFDHPHTFAYK
MDSSFLPAGADNGSAGGANNGGGAAQQAPPIREQDRLMPIANVIRIMRRVLPAHAKISDDAKETIQECVSEYISFITGEA
NERCQREQRKTITAEDVLWAMSRLGFDDYVEPLSVYLHRYREFEGEARGVGLAPAPPRGDHHHHHHSVPPSMLNKSRGPG
SGAVMLPHHHHHDMHASMYGGAVPPPPHHGFLMPHPQGGHYLPYPYEPTSYGGEHALASGYYGGAAYAPGNNGGSGDGSG
GSASHAPPGGSGGGFDHPHTFAYK
MDSSFLPAGADNGSAGGANNGGGAAQQAPPIREQDRLMPIANVIRIMRRVLPAHAKISDDAKETIQECVSEYISFITGEA
NERCQREQRKTITAEDVLWAMSRLGFDDYVEPLSVYLHRYREFEGEARGVGLAPAPPRGDHHHHHHSVPPSMLNKSRGPG
SGAVMLPHHHHHDMHASMYGGAVPPPPHHGFLMPHPQGGHYLPYPYEPTSYGGEHALASGYYGGAAYAPGNNGGSGDGSG
GSASHAPPGGSGGGFDHPHTFAYK
MDSSFLPAGADNGSAGGANNGGGAAQQAPPIREQDRLMPIANVIRIMRRVLPAHAKISDDAKETIQECVSEYISFITGEA
NERCQREQRKTITAEDVLWAMSRLGFDDYVEPLSVYLHRYREFEGEARGVGLAPAPPRGDHHHHHHSVPPSMLNKSRGPG
SGAVMLPHHHHHDMHASMYGGAVPPPPHHGFLMPHPQGGHYLPYPYEPTSYGGEHALASGYYGGAAYAPGNNGGSGDGSG
GSASHAPPGGSGGGFDHPHTFAYK
MDSSFLPAGADNGSAGGANNGGGAAQQAPPIREQDRLMPIANVIRIMRRVLPAHAKISDDAKETIQECVSEYISFITGEA
NERCQREQRKTITAEDVLWAMSRLGFDDYVEPLSVYLHRYREFEGEARGVGLAPAPPRGDHHHHHHSVPPSMLNKSRGPG
SGAVMLPHHHHHDMHASMYGGAVPPPPHHGFLMPHPQGGHYLPYPYEPTSYGGEHALASGYYGGAAYAPGNNGGSGDGSG
GSASHAPPGGSGGGFDHPHTFAYK
MDSSFLPAGADNGSAGGANNGGGAAQQAPPIREQDRLMPIANVIRIMRRVLPAHAKISDDAKETIQECVSEYISFITGEA
NERCQREQRKTITAEDVLWAMSRLGFDDYVEPLSVYLHRYREFEGEARGVGLAPAPPRGDHHHHHHSVPPSMLNKSRGPG
SGAVMLPHHHHHDMHASMYGGAVPPPPHHGFLMPHPQGGHYLPYPYEPTSYGGEHALASGYYGGAAYAPGNNGGSGDGSG
GSASHAPPGGSGGGFDHPHTFAYK
Secondary Structure Color Code | |
---|---|
BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
---|---|
PF00125 |
|
CCAAT-Dr1 |
|
PF00808 |
|
NF-YB |
|
Hover here to show all domains |
GGCCTGGTCAGGTCAACACATCGTC...
GGCCTGGTCAGGTCAACACATCGTCGTAGCCTCCTATTTAACGTATCCTCGCACATCACAAGAAGGACACTCTCCACCAGCCAGCCAGAGCCAGTAGCCACCACCAGATCGGCCTCCCCGTTGCTCATCACCAGCAAGAGCAACTCAGCAACCTAGCTAGCTATAGGTTTAGGTAGCAAGAGCCAATGGACTCCAGCTTCCTCCCTGCCGGCGCGGACAATGGCTCGGCGGGCGGCGCCAACAATGGCGGCGGCGCTGCTCAGCAGGCGCCGCCGATCCGCGAGCAGGACCGGCTGATGCCGATCGCGAACGTCATCCGCATCATGCGGCGCGTGCTGCCGGCGCACGCCAAGATCTCGGACGACGCCAAGGAGACGATCCAGGAGTGCGTGTCGGAGTACATCAGCTTCATCACGGGGGAGGCCAACGAGCGGTGCCAGCGGGAGCAGCGCAAGACCATCACCGCCGAGGACGTGCTGTGGGCCATGAGCCGCCTCGGCTTCGACGACTACGTCGAGCCGCTCAGCGTCTACCTCCACCGCTACCGCGAGTTCGAGGGCGAGGCGCGGGGCGTCGGCCTCGCCCCGGCCCCTCCGCGCGGCGACCACCACCACCACCACCACTCCGTGCCGCCATCGATGCTCAACAAGTCCCGCGGGCCCGGCTCCGGAGCCGTCATGCTACCGCACCACCACCACCACGACATGCACGCCTCCATGTACGGGGGCGCCGTGCCCCCGCCGCCGCACCACGGCTTCCTCATGCCACACCCACAGGGCGGCCACTACCTGCCTTACCCCTACGAGCCCACGTCGTACGGCGGCGAGCACGCCTTGGCCAGCGGGTACTATGGAGGGGCCGCGTACGCGCCGGGCAACAACGGCGGGAGCGGCGATGGCAGCGGCGGGAGCGCGTCGCACGCACCGCCGGGCGGCAGCGGCGGCGGCTTCGACCACCCGCACACGTTCGCGTACAAGTAGTTCGTTCAGCAAGCCATAGATCTGCGGCATGTACGTTGTACGCATGCATGCATGTATCGGGCGCATGCAGGTCGTCCTAGCTAGCAGTGTGCACGCCTAGCATTCCTATTGTGTTTGGGTAACCATGCATTCTCTAGTTTCTTAGCAGCTTGTTTTCCTTAAACTACGTACCACTCTCTAGTTTCTTAGAAGTAGCTTCCAG
MDSSFLPAGADNGSAGGANNGGGAAQQAPPIREQDRLMPIANVIRIMRRVLPAHAKISDDAKETIQECVSEYISFITGEA
NERCQREQRKTITAEDVLWAMSRLGFDDYVEPLSVYLHRYREFEGEARGVGLAPAPPRGDHHHHHHSVPPSMLNKSRGPG
SGAVMLPHHHHHDMHASMYGGAVPPPPHHGFLMPHPQGGHYLPYPYEPTSYGGEHALASGYYGGAAYAPGNNGGSGDGSG
GSASHAPPGGSGGGFDHPHTFAYK
CACCAGCAAGAGCAACTCAGCAACC...
CACCAGCAAGAGCAACTCAGCAACCTAGCTAGCTATAGGTTTAGGTAGCAAGAGCCAATGGACTCCAGCTTCCTCCCTGCCGGCGCGGACAATGGCTCGGCGGGCGGCGCCAACAATGGCGGCGGCGCTGCTCAGCAGGCGCCGCCGATCCGCGAGCAGGACCGGCTGATGCCGATCGCGAACGTCATCCGCATCATGCGGCGCGTGCTGCCGGCGCACGCCAAGATCTCGGACGACGCCAAGGAGACGATCCAGGAGTGCGTGTCGGAGTACATCAGCTTCATCACGGGGGAGGCCAACGAGCGGTGCCAGCGGGAGCAGCGCAAGACCATCACCGCCGAGGACGTGCTGTGGGCCATGAGCCGCCTCGGCTTCGACGACTACGTCGAGCCGCTCAGCGTCTACCTCCACCGCTACCGCGAGTTCGAGGGCGAGGCGCGGGGCGTCGGCCTCGCCCCGGCCCCTCCGCGCGGCGACCACCACCACCACCACCACTCCGTGCCGCCATCGATGCTCAACAAGTCCCGCGGGCCCGGCTCCGGAGCCGTCATGCTACCGCACCACCACCACCACGACATGCACGCCTCCATGTACGGGGGCGCCGTGCCCCCGCCGCCGCACCACGGCTTCCTCATGCCACACCCACAGGGCGGCCACTACCTGCCTTACCCCTACGAGCCCACGTCGTACGGCGGCGAGCACGCCTTGGCCAGCGGGTACTATGGAGGGGCCGCGTACGCGCCGGGCAACAACGGCGGGAGCGGCGATGGCAGCGGCGGGAGCGCGTCGCACGCACCGCCGGGCGGCAGCGGCGGCGGCTTCGACCACCCGCACACGTTCGCGTACAAGTAGTTCGTTCAGCAAGCCATAGATCTGCGGCATGTACGTTGTACGCATGCATGCATGTATCGGGCGCATGCAGGTCGTCCTAGCTAGCAGTGTGCACGCCTAGCATTCCTATTGTGTTTGGGTAACCATGCATTCTCTAGTTTCTTAGCAGCTTGTTTTCCTTAAACTACGTACCACTCTCTAGTTTCTTAGAAGTAGCTTCCAGTGCTTGTTGCCAGTACTTAGTACTCCTATTGTGTTTGGGTAACCGTTGCGACGACGAGATTATTTCA
MDSSFLPAGADNGSAGGANNGGGAAQQAPPIREQDRLMPIANVIRIMRRVLPAHAKISDDAKETIQECVSEYISFITGEA
NERCQREQRKTITAEDVLWAMSRLGFDDYVEPLSVYLHRYREFEGEARGVGLAPAPPRGDHHHHHHSVPPSMLNKSRGPG
SGAVMLPHHHHHDMHASMYGGAVPPPPHHGFLMPHPQGGHYLPYPYEPTSYGGEHALASGYYGGAAYAPGNNGGSGDGSG
GSASHAPPGGSGGGFDHPHTFAYK
ATGGACTCCAGCTTCCTCCCTGCCG...
ATGGACTCCAGCTTCCTCCCTGCCGGCGCGGACAATGGCTCGGCGGGCGGCGCCAACAATGGCGGCGGCGCTGCTCAGCAGGCGCCGCCGATCCGCGAGCAGGACCGGCTGATGCCGATCGCGAACGTCATCCGCATCATGCGGCGCGTGCTGCCGGCGCACGCCAAGATCTCGGACGACGCCAAGGAGACGATCCAGGAGTGCGTGTCGGAGTACATCAGCTTCATCACGGGGGAGGCCAACGAGCGGTGCCAGCGGGAGCAGCGCAAGACCATCACCGCCGAGGACGTGCTGTGGGCCATGAGCCGCCTCGGCTTCGACGACTACGTCGAGCCGCTCAGCGTCTACCTCCACCGCTACCGCGAGTTCGAGGGCGAGGCGCGGGGCGTCGGCCTCGCCCCGGCCCCTCCGCGCGGCGACCACCACCACCACCACCACTCCGTGCCGCCATCGATGCTCAACAAGTCCCGCGGGCCCGGCTCCGGAGCCGTCATGCTACCGCACCACCACCACCACGACATGCACGCCTCCATGTACGGGGGCGCCGTGCCCCCGCCGCCGCACCACGGCTTCCTCATGCCACACCCACAGGGCGGCCACTACCTGCCTTACCCCTACGAGCCCACGTCGTACGGCGGCGAGCACGCCTTGGCCAGCGGGTACTATGGAGGGGCCGCGTACGCGCCGGGCAACAACGGCGGGAGCGGCGATGGCAGCGGCGGGAGCGCGTCGCACGCACCGCCGGGCGGCAGCGGCGGCGGCTTCGACCACCCGCACACGTTCGCGTACAAGTAG
Copyright © 2023 Grassius.org | Last updated: 2023-06-26